STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2159PFAM: Endoribonuclease L-PSP; KEGG: scl:sce2000 translation initiation inhibitor. (137 aa)    
Predicted Functional Partners:
Cwoe_2161
PFAM: NADH:flavin oxidoreductase/NADH oxidase; monooxygenase FAD-binding; KEGG: scl:sce8661 oxidoreductase.
 
  
 0.952
Cwoe_2160
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: aav:Aave_3176 acyl-CoA dehydrogenase domain- containing protein.
 
 
   0.886
Cwoe_2158
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: scl:sce1998 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
     0.884
Cwoe_2157
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rso:RS02008 oxidoreductase protein.
 
     0.856
Cwoe_2817
PFAM: monooxygenase FAD-binding; KEGG: scl:sce8661 oxidoreductase.
 
    0.793
Cwoe_2162
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: azo:azo1927 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.773
Cwoe_4350
PFAM: Endoribonuclease L-PSP; KEGG: cti:RALTA_B2082 putative endoribonuclease L- PSP.
  
     0.736
Cwoe_2148
KEGG: pol:Bpro_4735 putative indolepyruvate oxidoreductase subunit B.
  
    0.650
Cwoe_3993
PFAM: Endoribonuclease L-PSP; KEGG: mlo:mlr1297 hypothetical protein.
  
     0.638
Cwoe_2149
Indolepyruvate ferredoxin oxidoreductase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: vap:Vapar_1490 indolepyruvate ferredoxin oxidoreductase.
 
     0.591
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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