STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2175PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: avi:Avi_5632 ABC transporter membrane spanning protein (oligopeptide). (317 aa)    
Predicted Functional Partners:
Cwoe_2176
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll0598 permease of oligopeptide ABC transporter.
  
 0.961
Cwoe_2177
PFAM: extracellular solute-binding protein family 5; KEGG: avi:Avi_5634 hypothetical protein.
 
 
 0.928
Cwoe_2174
KEGG: bja:bll2870 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
   0.872
Cwoe_3424
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: avi:Avi_5633 ABC transporter membrane spanning protein (dipeptide).
  
 0.836
Cwoe_5890
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gsu:GSU1435 peptide ABC transporter, permease protein.
  
 0.832
Cwoe_2799
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll2866 ABC transporter permease protein.
  
 0.831
Cwoe_2947
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gem:GM21_1592 binding-protein-dependent transport systems inner membrane component.
  
 0.831
Cwoe_3343
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0469 ABC transporter, permease.
  
 0.831
Cwoe_4371
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bav:BAV1646 ABC transporter, permease protein.
  
 0.831
Cwoe_5013
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psp:PSPPH_2744 ABC transporter, permease protein.
  
 0.831
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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