STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2238PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlg:Rleg_0424 binding-protein-dependent transport systems inner membrane component. (294 aa)    
Predicted Functional Partners:
Cwoe_2237
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0467 ABC transporter, permease.
  
 0.950
Cwoe_2236
PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMa0466 ABC transporter, periplasmic solute-binding protein.
 
   0.946
Cwoe_2240
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa0110 ABC transporter, ATP-binding protein.
  
 0.941
Cwoe_2239
KEGG: bav:BAV0998 oligopeptide ABC transporter,ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
    0.926
Cwoe_2227
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psb:Psyr_4215 binding-protein dependent transport system inner membrane protein.
  
 0.871
Cwoe_5043
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0467 ABC transporter, permease.
  
 0.835
Cwoe_5710
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0467 ABC transporter, permease.
  
 0.835
Cwoe_3342
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0467 ABC transporter, permease.
  
 0.834
Cwoe_0457
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr0988 permease protein of dipeptide ABC transporter.
  
 0.830
Cwoe_0928
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4120 binding-protein-dependent transport systems inner membrane component.
  
 0.830
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.