STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2303KEGG: smd:Smed_6317 hypothetical protein. (428 aa)    
Predicted Functional Partners:
Cwoe_2304
Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; KEGG: yen:YE2654 sensor kinase protein.
 
     0.804
Cwoe_2298
ABC-type sugar transport system periplasmic component-like protein; KEGG: lhk:LHK_01714 RbsB.
  
    0.787
Cwoe_2299
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: scl:sce2622 N-methylhydantoinase A, beta subunit.
       0.773
Cwoe_2300
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; KEGG: ara:Arad_7521 N-methylhydantoinase (ATP- hydrolyzing)/5-oxoprolinase protein.
       0.773
Cwoe_2301
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spe:Spro_1029 ABC transporter-related protein.
       0.773
Cwoe_2302
PFAM: inner-membrane translocator; KEGG: rhi:NGR_b04290 predicted AraH, ribose/xylose/arabinose/galactoside ABC-type transport system, permease components AraH.
       0.773
Cwoe_2305
Response regulator receiver and unknown domain protein; PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: aha:AHA_2455 transcriptional regulatory protein CitT.
       0.773
Cwoe_2306
PFAM: GntR domain protein; regulatory protein GntR HTH; protein of unknown function UPF0074; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_0962 GntR domain-containing protein.
       0.639
Cwoe_2295
PFAM: aminotransferase class-III; KEGG: psb:Psyr_4866 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.516
Cwoe_4070
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: pol:Bpro_0362 extracellular solute-binding protein.
 
     0.516
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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