STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2308PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1848 binding-protein-dependent transport systems inner membrane component. (332 aa)    
Predicted Functional Partners:
Cwoe_2309
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: hch:HCH_00011 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; binding-protein- dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.937
Cwoe_2307
PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_L_861 AgaA.
 
 0.935
Cwoe_2310
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL110446 putative ATP-binding component of ABC transporter.
  
 0.850
Cwoe_2107
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_0951 binding-protein-dependent transport systems inner membrane component.
  
 0.831
Cwoe_2783
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00788 peptide ABC transporter permease.
  
 0.831
Cwoe_2799
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll2866 ABC transporter permease protein.
  
 0.831
Cwoe_3343
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0469 ABC transporter, permease.
  
 0.831
Cwoe_4371
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bav:BAV1646 ABC transporter, permease protein.
  
 0.831
Cwoe_5119
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pca:Pcar_1867 ABC-type transport system protein.
  
 0.831
Cwoe_2228
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PB00092 peptide ABC transporter permease.
  
 0.830
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.