STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2322Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SM_b20290 putative transcriptional regulator protein. (357 aa)    
Predicted Functional Partners:
Cwoe_1817
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: mca:MCA2039 glutamate synthase, large subunit.
    
 
 0.697
Cwoe_2323
PFAM: extracellular solute-binding protein family 5; KEGG: mlo:mlr0985 hemin-binding lipoprotein.
  
    0.500
Cwoe_2327
Transcriptional regulator, CdaR; PFAM: purine catabolism PurC domain protein; helix- turn-helix Fis-type; regulatory protein LysR; KEGG: pag:PLES_34081 putative regulatory protein.
     
 0.487
Cwoe_5411
PFAM: glycoside hydrolase family 3 domain protein; KEGG: xac:XAC3869 beta-glucosidase.
 
   
 0.486
Cwoe_2324
KEGG: mlo:mlr0986 peptide ABC transporter; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.484
Cwoe_2325
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr0987 ABC transporter permease.
       0.484
Cwoe_2326
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr0988 permease protein of dipeptide ABC transporter.
       0.484
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
   
 
 0.455
Cwoe_1874
TIGRFAM: IMP dehydrogenase family protein; PFAM: IMP dehydrogenase/GMP reductase; KEGG: inosine-5-monophosphate dehydrogenase; K00088 IMP dehydrogenase.
    
 
 0.425
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
    
   0.405
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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