STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2327Transcriptional regulator, CdaR; PFAM: purine catabolism PurC domain protein; helix- turn-helix Fis-type; regulatory protein LysR; KEGG: pag:PLES_34081 putative regulatory protein. (539 aa)    
Predicted Functional Partners:
Cwoe_2324
KEGG: mlo:mlr0986 peptide ABC transporter; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
    0.784
Cwoe_2326
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr0988 permease protein of dipeptide ABC transporter.
  
    0.774
Cwoe_2323
PFAM: extracellular solute-binding protein family 5; KEGG: mlo:mlr0985 hemin-binding lipoprotein.
       0.773
Cwoe_2325
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr0987 ABC transporter permease.
       0.773
Cwoe_0495
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: pae:PA1915 hypothetical protein.
 
     0.770
Cwoe_0531
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: pae:PA1915 hypothetical protein.
 
     0.768
Cwoe_4405
Transcriptional regulator, CdaR; KEGG: aha:AHA_0640 carbohydrate diacid regulator.
  
     0.723
Cwoe_4118
Putative transcriptional regulator, PucR family; KEGG: mpt:Mpe_B0536 CdaR family transcriptional regulator.
 
     0.719
Cwoe_1641
KEGG: mpt:Mpe_B0536 CdaR family transcriptional regulator.
  
     0.713
Cwoe_2290
KEGG: tmz:Tmz1t_0150 transcriptional regulator, CdaR.
 
     0.713
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.