STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2342ABC-type sugar transport system periplasmic component-like protein; KEGG: spe:Spro_3931 hypothetical protein. (378 aa)    
Predicted Functional Partners:
Cwoe_2343
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SM_b20673 putative sugar uptake ABC transporter ATP-binding protein.
  
 0.985
Cwoe_2344
PFAM: inner-membrane translocator; KEGG: ara:Arad_9661 sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.880
Cwoe_4385
PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: pfl:PFL_3824 sensory box histidine kinase/response regulator.
   
 
 0.844
Cwoe_3938
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: rlg:Rleg_6012 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.665
Cwoe_5361
PFAM: Stage II sporulation E family protein; response regulator receiver; SMART: protein phosphatase 2C domain protein; response regulator receiver; KEGG: dma:DMR_38770 response regulator receiver protein.
 
 
 
 0.528
Cwoe_4611
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bte:BTH_I2216 MerR family transcriptional regulator.
  
     0.499
Cwoe_2341
TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: scl:sce9237 chromate transport protein.
       0.476
Cwoe_3136
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; ATP-binding region ATPase domain protein; SMART: response regulator receiver; Hpt domain protein; ATP-binding region ATPase domain protein; CheW domain protein; KEGG: ank:AnaeK_2678 CheA signal transduction histidine kinase.
   
 
 0.463
Cwoe_5146
Hypothetical protein.
  
     0.458
Cwoe_4487
Transcriptional regulator, CdaR; KEGG: hypothetical protein.
  
     0.449
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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