STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2415PFAM: FG-GAP repeat protein; KEGG: scl:sce1236 putative secreted protein. (720 aa)    
Predicted Functional Partners:
Cwoe_0216
PFAM: FG-GAP repeat protein; KEGG: hypothetical protein.
 
   0.806
Cwoe_2416
Hypothetical protein.
       0.773
Cwoe_1256
PFAM: FG-GAP repeat protein; KEGG: sfu:Sfum_1623 ASPIC/UnbV domain protein.
 
  
 0.736
Cwoe_2417
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: rfr:Rfer_2227 XRE family transcriptional regulator.
 
    0.735
Cwoe_0063
CheC, inhibitor of MCP methylation; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: tgr:Tgr7_1329 flagellar motor switch protein FliN.
   
 
 0.665
Cwoe_1255
Hypothetical protein; KEGG: hch:HCH_01486 FG-GAP repeat-containing protein.
 
  
 0.574
Cwoe_4497
PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; KEGG: xcv:XCV4444 putative hemagglutinin-related protein.
 
   0.562
Cwoe_3327
PFAM: Ig family protein; PKD domain containing protein; FG-GAP repeat protein; SMART: PKD domain containing protein; Integrin alpha beta-propellor repeat protein; KEGG: noc:Noc_2093 integrins alpha chain.
 
   0.537
Cwoe_0642
SMART: Na-Ca exchanger/integrin-beta4; KEGG: apomucin.
  
     0.497
Cwoe_0540
Hypothetical protein; KEGG: mxa:MXAN_5598 OmpA domain-containing protein.
 
   
 0.486
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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