STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2536TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: bxe:Bxe_C0536 hydrogenase expression/formation protein, HupF/HypC. (92 aa)    
Predicted Functional Partners:
Cwoe_2538
TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: bbt:BBta_0474 hydrogenase expression/formation.
 
 
 0.997
Cwoe_2539
TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: reh:PHG076 HypE2.
 
 
 0.996
Cwoe_2548
TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: sat:SYN_00599 Ni2+ insertion GTPase.
 
  
 0.971
Cwoe_2550
TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; KEGG: gur:Gura_1950 (NiFe) hydrogenase maturation protein HypF.
 
 
 0.948
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.942
Cwoe_2540
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: reh:PHG064 putative [NiFe] hydrogenase small subunit.
 
 
 0.937
Cwoe_2546
TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: reh:PHG070 putative [NiFe] hydrogenase- specific C-terminal protease.
 
  
 0.930
Cwoe_2541
PFAM: nickel-dependent hydrogenase large subunit; KEGG: reh:PHG065 putative [NiFe] hydrogenase large subunit.
 
 
 0.927
Cwoe_2545
KEGG: reh:PHG069 hypothetical protein.
 
  
 0.786
Cwoe_2543
KEGG: reh:PHG067 hypothetical protein.
 
     0.730
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.