STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2586Hypothetical protein; KEGG: dac:Daci_1988 LysR family transcriptional regulator. (251 aa)    
Predicted Functional Partners:
Cwoe_5807
KEGG: scl:sce6655 protein kinase.
  
     0.757
Cwoe_1285
PFAM: metallophosphoesterase; KEGG: rec:RHECIAT_PC0000301 putative serine/threonine-specific phosphatase protein.
  
     0.692
Cwoe_5660
KEGG: sfu:Sfum_3494 hypothetical protein.
  
     0.691
Cwoe_1804
KEGG: acp:A2cp1_1438 ATP-dependent nuclease subunit B-like protein.
  
     0.676
Cwoe_1449
KEGG: hypothetical protein.
  
     0.675
Cwoe_2585
PFAM: Protein of unknown function DUF2237; KEGG: hypothetical protein, conserved; K09966 hypothetical protein.
       0.661
Cwoe_3658
Putative transcriptional regulator, Crp/Fnr family; KEGG: scl:sce0032 CRP family transcriptional regulator.
  
     0.661
Cwoe_1652
KEGG: hypothetical protein LOC100123740.
  
     0.640
Cwoe_4062
KEGG: fibrocystin-L-like protein.
  
     0.637
Cwoe_0335
SMART: ParB domain protein nuclease; KEGG: vesicular transport-associated repeat protein.
  
     0.629
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.