STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2604KEGG: dol:Dole_2955 AAA family ATPase. (426 aa)    
Predicted Functional Partners:
Cwoe_5813
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: noc:Noc_0057 hypothetical protein.
 
     0.652
vapC-5
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
     0.592
Cwoe_2605
Hypothetical protein; KEGG: bmn:BMA10247_A1129 polyketide synthase.
       0.532
Cwoe_2606
KEGG: xom:XOO_0282 hypothetical protein.
       0.532
Cwoe_2374
PFAM: filamentation induced by cAMP protein Fic; KEGG: xac:XAC0234 hypothetical protein.
 
     0.519
Cwoe_2194
PFAM: filamentation induced by cAMP protein Fic; KEGG: afw:Anae109_0607 filamentation induced by cAMP protein Fic.
 
     0.514
Cwoe_5577
KEGG: pna:Pnap_4574 hypothetical protein.
 
     0.504
Cwoe_5578
PFAM: Domain of unknown function DUF1814; KEGG: rle:pRL100221 hypothetical protein.
 
     0.478
Cwoe_1469
PFAM: TrwC relaxase; KEGG: tbd:Tbd_1686 putative ATP-dependent exoDNAse (exonuclease V) alpha subunit.
 
     0.454
Cwoe_5696
PFAM: filamentation induced by cAMP protein Fic; KEGG: eic:NT01EI_2503 hypothetical protein.
 
     0.432
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.