STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2623PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dal:Dalk_3566 CBS domain containing membrane protein. (147 aa)    
Predicted Functional Partners:
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.883
Cwoe_2622
PFAM: Citrate transporter; Arsenical pump membrane protein; KEGG: dma:DMR_06440 arsenical pump membrane protein.
 
     0.813
Cwoe_1860
PFAM: histone deacetylase superfamily; KEGG: scl:sce6159 histone deacetylase family protein.
  
  
 0.518
Cwoe_2777
PFAM: histone deacetylase superfamily; KEGG: bpr:GBP346_A0044 histone deacetylase family protein.
  
  
 0.518
Cwoe_2621
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aeh:Mlg_2692 methyltransferase type 11.
       0.497
Cwoe_2624
PFAM: FAD dependent oxidoreductase; KEGG: GF14644 gene product from transcript GF14644- RA; K00109 2-hydroxyglutarate dehydrogenase.
     
 0.496
Cwoe_2620
Hypothetical protein.
       0.458
Cwoe_2625
Hypothetical protein.
       0.441
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.