STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2694KEGG: gbm:Gbem_2666 glucose/sorbosone dehydrogenase- like protein. (520 aa)    
Predicted Functional Partners:
Cwoe_2695
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rfr:Rfer_0523 acyl-CoA dehydrogenase-like.
  
    0.543
Cwoe_2696
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pla:Plav_0474 enoyl-CoA hydratase.
       0.540
Cwoe_2697
PFAM: regulatory protein TetR; KEGG: xac:XAC0266 AcrR family transcriptional regulator.
       0.540
Cwoe_2692
PFAM: periplasmic binding protein; KEGG: atc:AGR_pAT_447 DtxR/iron regulated lipoprotein precursor.
       0.536
Cwoe_2693
PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: rme:Rmet_4199 FAD-binding 9, siderophore- interacting.
       0.536
Cwoe_0248
Hypothetical protein; KEGG: COL5A2; collagen, type V, alpha 2; K06236 collagen, type I/II/III/V/XI, alpha.
  
     0.439
Cwoe_1954
PFAM: NHL repeat containing protein; KEGG: bbt:BBta_1132 hypothetical protein.
  
     0.429
Cwoe_2444
Scyllo-inosamine-4-phosphate amidinotransferase; KEGG: bja:blr2071 inosamine-phosphate amidinotransferas.
  
     0.413
Cwoe_3554
PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: neu:NE1543 multicopper oxidase type 1.
 
     0.406
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.