STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2699Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: hch:HCH_03585 transcriptional regulator. (164 aa)    
Predicted Functional Partners:
Cwoe_0391
PFAM: protein of unknown function DUF6 transmembrane; KEGG: cti:RALTA_A0036 transmembrane protein, similar to PecM, involved in pectinase, cellulase, and blue pigment regulation.
 
  
 0.755
Cwoe_4525
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rec:RHECIAT_CH0000319 putative transcriptional regulator protein, MarR family.
  
     0.623
Cwoe_2700
KEGG: pca:Pcar_0332 hypothetical protein.
       0.550
Cwoe_2701
PFAM: peptidase S45 penicillin amidase; KEGG: spe:Spro_3142 penicillin amidase.
       0.454
Cwoe_4783
PFAM: regulatory protein TetR; KEGG: mlo:mlr3851 TetR family transcriptional regulator.
  
     0.440
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.