STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2742PFAM: peptidase M24; KEGG: gur:Gura_1824 peptidase M24. (406 aa)    
Predicted Functional Partners:
Cwoe_2740
PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: bmj:BMULJ_00472 3-oxoacyl-[acyl-carrier protein] reductase.
  
   0.793
Cwoe_2741
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: vei:Veis_3148 SMP-30/gluconolaconase/LRE domain-containing protein.
  
    0.779
Cwoe_2738
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lhk:LHK_01712 RbsA.
       0.778
Cwoe_2739
PFAM: inner-membrane translocator; KEGG: lch:Lcho_2222 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
       0.777
Cwoe_3845
PFAM: peptidase M24; creatinase; KEGG: mes:Meso_2395 peptidase M24.
  
     0.770
Cwoe_0525
PFAM: peptidase M24; KEGG: ara:Arad_7976 Xaa-Pro aminopeptidase.
  
     0.765
Cwoe_0811
PFAM: creatinase; peptidase M24; KEGG: atc:AGR_pAT_704 Xaa-Pro dipeptidase.
  
     0.752
Cwoe_3859
PFAM: peptidase M24; creatinase; KEGG: ara:Arad_7975 Xaa-Pro dipeptidase protein.
  
     0.751
Cwoe_1454
PFAM: peptidase M24; creatinase; KEGG: sme:SMa1329 peptidase.
  
     0.734
Cwoe_2750
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: yps:YPTB1320 D-isomer specific 2-hydroxyacid dehydrogenase family protein.
   
  0.712
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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