STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2770PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bmj:BMULJ_04230 putative short-chain alcohol dehydrogenase. (256 aa)    
Predicted Functional Partners:
Cwoe_2769
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: psb:Psyr_0771 peptidase M20:peptidase M20.
 
 
   0.817
Cwoe_2771
PFAM: Transketolase central region; Transketolase domain protein; KEGG: azo:azo3868 acetoin dehydrogenase, beta subunit.
  
   0.793
Cwoe_2773
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gur:Gura_2263 glyoxalase/bleomycin resistance protein/dioxygenase.
  
   0.788
Cwoe_2772
PFAM: dehydrogenase E1 component; KEGG: pap:PSPA7_0937 putative dehydrogenase E1 component.
   
   0.787
Cwoe_3117
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: smd:Smed_3033 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   0.787
Cwoe_4721
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bba:Bd3130 short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   0.779
Cwoe_2766
KEGG: bav:BAV2412 membrane protein.
       0.773
Cwoe_2767
KEGG: afw:Anae109_4055 hypothetical protein.
       0.773
Cwoe_2768
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pap:PSPA7_4121 putative transcriptional regulator.
       0.773
Cwoe_4026
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: scl:sce0978 putative oxidoreductase.
  
     0.769
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.