STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2776TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989; KEGG: scl:sce4913 hypothetical protein. (280 aa)    
Predicted Functional Partners:
Cwoe_2775
TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989; KEGG: scl:sce4914 hypothetical protein.
 
   
0.836
Cwoe_1061
PFAM: Domain of unknown function DUF1989; KEGG: bxe:Bxe_C1329 hypothetical protein.
 
   
 0.790
Cwoe_1574
KEGG: xac:XAC4326 UreA amidolyase; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1.
 
   
 0.790
Cwoe_2330
PFAM: Domain of unknown function DUF1989; KEGG: rlg:Rleg_5710 hypothetical protein.
 
   
 0.788
Cwoe_2558
PFAM: Domain of unknown function DUF1989; KEGG: rlg:Rleg_5710 hypothetical protein.
 
   
 0.786
Cwoe_2777
PFAM: histone deacetylase superfamily; KEGG: bpr:GBP346_A0044 histone deacetylase family protein.
       0.773
Cwoe_2756
PFAM: AIG2 family protein; KEGG: ebd:ECBD_4206 conserved hypothetical protein, hypothetical protein.
  
     0.768
Cwoe_1573
KEGG: similar to YALI0E07271p; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2.
 
   
 0.754
Cwoe_2778
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; KEGG: xca:xccb100_0783 transcriptional regulator, GntR family.
       0.556
Cwoe_2779
KEGG: bja:bll2874 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.556
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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