STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2878PFAM: alpha/beta hydrolase fold; KEGG: bac:BamMC406_1202 hypothetical protein. (312 aa)    
Predicted Functional Partners:
Cwoe_5663
PFAM: regulatory protein TetR; KEGG: abo:ABO_1718 TetR family transcriptional regulator.
  
     0.682
Cwoe_2879
PFAM: beta-lactamase domain protein; KEGG: rlg:Rleg_5818 beta-lactamase domain protein.
  
    0.664
Cwoe_0199
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: aci:ACIAD1412 putative acyl-CoA dehydrogenase.
  
  0.659
Cwoe_4750
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: pmy:Pmen_3330 MerR family transcriptional regulator.
  
     0.633
Cwoe_4271
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: abo:ABO_2697 hypothetical protein.
  
     0.629
Cwoe_0198
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: abo:ABO_1701 acyl-CoA dehydrogenase domain- containing protein.
  
  0.591
Cwoe_1820
PFAM: flavin-containing monooxygenase FMO; KEGG: pla:Plav_0443 flavin-containing monooxygenase.
 
 
 
 0.563
Cwoe_2880
Hypothetical protein; KEGG: RWP1; RWP-RK transcription factor.
       0.531
Cwoe_0515
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: cti:RALTA_A1127 putative transcriptional egulator, TetR family.
  
     0.525
Cwoe_4571
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bte:BTH_II0803 oxidoreductase, FAD/FMN- binding.
 
  
 0.515
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.