STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2897PFAM: SCP-like extracellular; KEGG: mpt:Mpe_A3565 hypothetical protein. (279 aa)    
Predicted Functional Partners:
Cwoe_2898
PFAM: peptidase M22 glycoprotease; KEGG: acp:A2cp1_3721 peptidase M22 glycoprotease.
       0.475
Cwoe_2901
PFAM: glutaredoxin 2; glutaredoxin; KEGG: bph:Bphy_0838 glutaredoxin 2.
  
    0.471
tsaD
Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
    0.458
Cwoe_2899
TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: ppd:Ppro_2631 ribosomal-protein-alanine acetyltransferase.
       0.455
Cwoe_5056
PFAM: beta-lactamase domain protein; KEGG: hha:Hhal_1314 beta-lactamase domain- containing protein.
 
     0.432
Cwoe_0047
PFAM: flagellar hook-length control protein; KEGG: hypothetical protein.
  
    0.429
Cwoe_3335
KEGG: dac:Daci_3466 hypothetical protein.
  
    0.429
Cwoe_4217
KEGG: bba:Bd2872 hypothetical protein.
  
    0.429
Cwoe_4426
KEGG: hypothetical protein.
  
    0.429
Cwoe_4852
Hypothetical protein; KEGG: GK10816 gene product from transcript GK10816- RA.
  
    0.429
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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