STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2912PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: lip:LI0774 potassium transporter peripheral membrane component. (223 aa)    
Predicted Functional Partners:
Cwoe_3474
PFAM: cation transporter; KEGG: dol:Dole_3217 TrkH family potassium uptake protein.
 
 
 0.936
Cwoe_2911
PFAM: TrkA-N domain protein; KEGG: lch:Lcho_4070 potassium transporter peripheral membrane component.
 
  
0.840
Cwoe_2913
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_5300 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 0.794
Cwoe_2914
Hypothetical protein.
       0.773
Cwoe_2910
PFAM: UspA domain protein; amino acid permease- associated region; KEGG: xac:XAC4354 amino acid transporter.
     
 0.733
Cwoe_2908
PFAM: UspA domain protein; amino acid permease- associated region; KEGG: bpy:Bphyt_6715 amino acid permease-associated region.
     
 0.716
Cwoe_2909
Hypothetical protein.
       0.686
Cwoe_3722
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.633
Cwoe_2907
KEGG: hypothetical protein LOC100243991.
  
    0.616
Cwoe_5522
TIGRFAM: molybdopterin converting factor, subunit 1; MoaD family protein; PFAM: molybdopterin biosynthesis MoaE protein; thiamineS protein; KEGG: mxa:MXAN_2564 molybdopterin converting factor, subunits 1/2.
  
    0.577
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.