STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2945PFAM: extracellular solute-binding protein family 5; KEGG: rlg:Rleg_4682 extracellular solute-binding protein family 5. (565 aa)    
Predicted Functional Partners:
Cwoe_2947
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gem:GM21_1592 binding-protein-dependent transport systems inner membrane component.
   0.889
Cwoe_2946
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_4795 binding-protein-dependent transport systems inner membrane component.
 
 
 0.878
Cwoe_0132
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB2519 ABC transporter inner membrane protein.
   0.786
Cwoe_0114
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_0951 binding-protein-dependent transport systems inner membrane component.
   0.747
Cwoe_5013
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psp:PSPPH_2744 ABC transporter, permease protein.
   0.744
Cwoe_5119
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pca:Pcar_1867 ABC-type transport system protein.
   0.743
Cwoe_2783
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00788 peptide ABC transporter permease.
   0.733
Cwoe_0929
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcs:BCAN_B1103 peptide ABC transporter permease.
   0.729
Cwoe_0455
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr0987 ABC transporter permease.
   0.726
Cwoe_2326
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr0988 permease protein of dipeptide ABC transporter.
 
 
 0.722
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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