STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3055PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: scl:sce0751 GntR family transcriptional regulator. (285 aa)    
Predicted Functional Partners:
Cwoe_3056
PFAM: FAD linked oxidase domain protein; KEGG: scl:sce0752 putative glycolate oxidase.
  
    0.783
Cwoe_2203
PFAM: GntR domain protein; regulatory protein GntR HTH; protein of unknown function UPF0074; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_0962 GntR domain-containing protein.
  
     0.775
Cwoe_5612
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: dvl:Dvul_0527 GntR domain-containing protein.
  
     0.775
Cwoe_0632
PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: bpt:Bpet3877 GntR family transcriptional regulator.
  
     0.774
Cwoe_2500
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: oan:Oant_3401 GntR domain-containing protein.
  
     0.774
Cwoe_4787
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: atc:AGR_L_3126 hypothetical protein.
  
     0.774
Cwoe_5046
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: dvm:DvMF_1205 GntR domain protein.
  
     0.774
Cwoe_1163
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_CH00340 GntR family transcriptional regulator.
  
     0.772
Cwoe_0277
PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: dol:Dole_2617 regulatory protein GntR HTH.
  
     0.689
Cwoe_2778
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; KEGG: xca:xccb100_0783 transcriptional regulator, GntR family.
  
    0.614
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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