Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cwoe_0266 | Cwoe_1948 | Cwoe_0266 | Cwoe_1948 | Hypothetical protein. | PFAM: Luciferase-like, subgroup; KEGG: bxe:Bxe_C0985 alkanesulfonate monooxygenase. | 0.589 |
Cwoe_0266 | Cwoe_3116 | Cwoe_0266 | Cwoe_3116 | Hypothetical protein. | TIGRFAM: probable F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup; KEGG: rpi:Rpic_0157 luciferase-like monooxygenase. | 0.778 |
Cwoe_0266 | Cwoe_4149 | Cwoe_0266 | Cwoe_4149 | Hypothetical protein. | PFAM: protein of unknown function UPF0052 and CofD; KEGG: eba:p2A344 LPPG:FO 2-phospho-L-lactate transferase. | 0.815 |
Cwoe_0266 | Cwoe_4151 | Cwoe_0266 | Cwoe_4151 | Hypothetical protein. | TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; KEGG: bpy:Bphyt_4255 F420-dependent oxidoreductase. | 0.743 |
Cwoe_0266 | Cwoe_4790 | Cwoe_0266 | Cwoe_4790 | Hypothetical protein. | PFAM: Luciferase-like, subgroup; KEGG: aci:ACIAD2543 putative monooxygenase oxidoreductase protein. | 0.511 |
Cwoe_0266 | Cwoe_4922 | Cwoe_0266 | Cwoe_4922 | Hypothetical protein. | Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: bpy:Bphyt_4731 luciferase-like monooxygenase. | 0.772 |
Cwoe_0266 | Cwoe_5156 | Cwoe_0266 | Cwoe_5156 | Hypothetical protein. | Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: eca:ECA0071 putative monooxygenase. | 0.662 |
Cwoe_0266 | fbiD | Cwoe_0266 | Cwoe_4150 | Hypothetical protein. | 2-phospho-L-lactate guanylyltransferase CofC; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor. | 0.724 |
Cwoe_0512 | Cwoe_1948 | Cwoe_0512 | Cwoe_1948 | Hypothetical protein. | PFAM: Luciferase-like, subgroup; KEGG: bxe:Bxe_C0985 alkanesulfonate monooxygenase. | 0.556 |
Cwoe_0512 | Cwoe_3116 | Cwoe_0512 | Cwoe_3116 | Hypothetical protein. | TIGRFAM: probable F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup; KEGG: rpi:Rpic_0157 luciferase-like monooxygenase. | 0.750 |
Cwoe_0512 | Cwoe_4149 | Cwoe_0512 | Cwoe_4149 | Hypothetical protein. | PFAM: protein of unknown function UPF0052 and CofD; KEGG: eba:p2A344 LPPG:FO 2-phospho-L-lactate transferase. | 0.782 |
Cwoe_0512 | Cwoe_4151 | Cwoe_0512 | Cwoe_4151 | Hypothetical protein. | TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; KEGG: bpy:Bphyt_4255 F420-dependent oxidoreductase. | 0.659 |
Cwoe_0512 | Cwoe_4790 | Cwoe_0512 | Cwoe_4790 | Hypothetical protein. | PFAM: Luciferase-like, subgroup; KEGG: aci:ACIAD2543 putative monooxygenase oxidoreductase protein. | 0.466 |
Cwoe_0512 | Cwoe_4922 | Cwoe_0512 | Cwoe_4922 | Hypothetical protein. | Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: bpy:Bphyt_4731 luciferase-like monooxygenase. | 0.775 |
Cwoe_0512 | Cwoe_5156 | Cwoe_0512 | Cwoe_5156 | Hypothetical protein. | Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: eca:ECA0071 putative monooxygenase. | 0.646 |
Cwoe_0512 | fbiD | Cwoe_0512 | Cwoe_4150 | Hypothetical protein. | 2-phospho-L-lactate guanylyltransferase CofC; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor. | 0.642 |
Cwoe_1948 | Cwoe_0266 | Cwoe_1948 | Cwoe_0266 | PFAM: Luciferase-like, subgroup; KEGG: bxe:Bxe_C0985 alkanesulfonate monooxygenase. | Hypothetical protein. | 0.589 |
Cwoe_1948 | Cwoe_0512 | Cwoe_1948 | Cwoe_0512 | PFAM: Luciferase-like, subgroup; KEGG: bxe:Bxe_C0985 alkanesulfonate monooxygenase. | Hypothetical protein. | 0.556 |
Cwoe_1948 | Cwoe_3116 | Cwoe_1948 | Cwoe_3116 | PFAM: Luciferase-like, subgroup; KEGG: bxe:Bxe_C0985 alkanesulfonate monooxygenase. | TIGRFAM: probable F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup; KEGG: rpi:Rpic_0157 luciferase-like monooxygenase. | 0.766 |
Cwoe_1948 | Cwoe_4149 | Cwoe_1948 | Cwoe_4149 | PFAM: Luciferase-like, subgroup; KEGG: bxe:Bxe_C0985 alkanesulfonate monooxygenase. | PFAM: protein of unknown function UPF0052 and CofD; KEGG: eba:p2A344 LPPG:FO 2-phospho-L-lactate transferase. | 0.712 |
page 1 of 4