STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3148PFAM: Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: cvi:CV_3953 hypothetical protein. (354 aa)    
Predicted Functional Partners:
Cwoe_2448
MCP methyltransferase, CheR-type; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Methyltransferase type 11; MCP methyltransferase CheR- type; methyltransferase small; Methyltransferase type 12; Thioesterase; phosphopantetheine-binding; KEGG: sml:Smlt2818 enterobactin synthase subunit F.
  
 0.848
Cwoe_3151
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; KEGG: gsu:GSU0687 dihydroflavonol 4-reductase, putative.
 
  
 0.757
Cwoe_3149
PFAM: FAD linked oxidase domain protein; KEGG: cbg:CbuG_0296 alkyldihydroxyacetonephosphate synthase.
 
  
 0.726
Cwoe_3150
PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: gsu:GSU1677 AMP-binding enzyme/acyltransferase.
 
 
 0.668
Cwoe_3508
PFAM: AMP-dependent synthetase and ligase; KEGG: psa:PST_0623 AMP-dependent synthetase and ligase.
    
 0.593
Cwoe_1388
PFAM: AMP-dependent synthetase and ligase; KEGG: afw:Anae109_1529 AMP-dependent synthetase and ligase.
    
 0.557
Cwoe_2447
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3618 non-ribosomal peptide synthetase.
  
 0.507
Cwoe_3147
Hypothetical protein.
       0.446
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.