STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3344KEGG: sme:SMa0470 ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (609 aa)    
Predicted Functional Partners:
Cwoe_3343
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0469 ABC transporter, permease.
  
 0.878
Cwoe_3342
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0467 ABC transporter, permease.
  
 0.844
Cwoe_3345
PFAM: peptidase M24; creatinase; KEGG: dps:DP0126 Xaa-Pro dipeptidase.
       0.773
Cwoe_2947
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gem:GM21_1592 binding-protein-dependent transport systems inner membrane component.
  
 0.677
Cwoe_3349
PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMa0466 ABC transporter, periplasmic solute-binding protein.
  
    0.574
Cwoe_3350
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S15; KEGG: afw:Anae109_0118 peptidase S9 prolyl oligopeptidase.
       0.565
Cwoe_3346
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: shl:Shal_3317 mandelate racemase/muconate lactonizing protein.
       0.545
Cwoe_3347
PFAM: X-Pro dipeptidyl-peptidase domain protein; peptidase S15; KEGG: cps:CPS_3343 putative acylase.
       0.545
Cwoe_3348
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: mxa:MXAN_2016 prolyl endopeptidase precursor PEP.
       0.545
Cwoe_3341
Transcriptional regulator, CdaR; PFAM: GAF domain protein; KEGG: bpd:BURPS668_A1119 putative purine catabolism transcriptional regulator.
       0.505
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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