STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3392PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: oan:Oant_0131 1A family penicillin-binding protein. (662 aa)    
Predicted Functional Partners:
Cwoe_1872
Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bpt:Bpet3320 penicillin-binding protein precursor; Belongs to the peptidase S11 family.
 
 
 0.925
Cwoe_3542
TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: bra:BRADO0522 putative penicillin-binding protein PbpC/MrcB-like.
  
  
 
0.921
Cwoe_0739
PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: gur:Gura_4141 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.914
Cwoe_5560
PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; KEGG: mca:MCA0105 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.914
Cwoe_1418
PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mms:mma_1576 D-alanyl-D-alanine carboxypeptidase.
     
 0.906
Cwoe_4758
PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: smt:Smal_1102 peptidase M15B and M15C dd- carboxypeptidase VanY/endolysin.
     
 0.906
Cwoe_5899
PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: rpb:RPB_0041 penicillin-binding protein 1A.
  
  
 
0.903
Cwoe_2661
KEGG: bav:BAV3173 penicillin-binding protein; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
 
 
 
 0.787
Cwoe_2877
TIGRFAM: DivIVA domain; KEGG: scl:sce8592 hypothetical protein.
   
 
 0.768
Cwoe_2662
TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: gme:Gmet_0929 rod shape-determining protein RodA; Belongs to the SEDS family.
 
 
 
 0.751
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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