STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3408PFAM: aldo/keto reductase; KEGG: pfo:Pfl01_0252 aldo/keto reductase. (345 aa)    
Predicted Functional Partners:
Cwoe_3407
TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: spe:Spro_0189 putative ammonia monooxygenase.
       0.718
Cwoe_4551
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: mpt:Mpe_A0936 putative alcohol dehydrogenase.
    
 0.598
Cwoe_0941
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: mxa:MXAN_5069 aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.505
Cwoe_3406
PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: gem:GM21_2191 methyl-accepting chemotaxis sensory transducer.
       0.502
Cwoe_0084
PFAM: aldo/keto reductase; KEGG: oan:Oant_3013 2,5-didehydrogluconate reductase.
  
 
 0.501
Cwoe_3914
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: hypothetical protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.439
Cwoe_5245
Beta-galactosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: sde:Sde_2632 HflK; Belongs to the glycosyl hydrolase 2 family.
 
    0.432
Cwoe_3409
KEGG: tmz:Tmz1t_0590 protein of unknown function DUF1555.
       0.408
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.