STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3675PFAM: protein of unknown function UPF0102; KEGG: gme:Gmet_2864 hypothetical protein; Belongs to the UPF0102 family. (122 aa)    
Predicted Functional Partners:
Cwoe_3674
KEGG: ank:AnaeK_3688 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
 
  
 0.892
Cwoe_3673
TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: bcm:Bcenmc03_3144 DNA protecting protein DprA.
 
    0.760
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
 
     0.638
Cwoe_4601
KEGG: hha:Hhal_0964 competence protein F.
 
    0.637
Cwoe_2831
TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: ade:Adeh_1270 DNA internalization-related competence protein ComEC/Rec2.
  
    0.550
Cwoe_3672
TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; hydroxyethylthiazole kinase; KEGG: sfu:Sfum_1692 phosphomethylpyrimidine kinase.
       0.548
Cwoe_0829
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: noc:Noc_0335 PAS sensor diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein.
  
    0.541
Cwoe_1770
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: noc:Noc_0335 PAS sensor diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein.
  
    0.541
Cwoe_2934
Diguanylate cyclase and metal dependent phosphohydrolase; KEGG: mxa:MXAN_4232 response regulator; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; metal- dependent phosphohydrolase HD sub domain; SMART: GGDEF domain containing protein; metal- dependent phosphohydrolase HD region.
   
    0.516
Cwoe_0062
PFAM: surface presentation of antigens (SPOA) protein; KEGG: nam:NAMH_1346 flagellar motor switch protein FliM.
   
    0.468
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.