STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3712Hypothetical protein; KEGG: scl:sce1109 integral membrane protein. (446 aa)    
Predicted Functional Partners:
Cwoe_3710
PFAM: glycosyl transferase family 2; KEGG: amc:MADE_02590 glycosyl transferase, family 2.
  
  
 0.821
Cwoe_3711
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bra:BRADO7054 putative S-adenosyl-L- methionine (SAM)-methyltransferases.
       0.798
Cwoe_5787
TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: maq:Maqu_2629 glucose-1-phosphate thymidylyltransferase.
  
  
 0.748
Cwoe_3157
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.741
Cwoe_5296
KEGG: ade:Adeh_2766 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.737
Cwoe_5516
KEGG: ank:AnaeK_2858 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.737
Cwoe_4614
Nucleotide sugar dehydrogenase; KEGG: ccv:CCV52592_1223 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase.
  
  
 0.714
Cwoe_3713
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
    0.665
Cwoe_3714
PFAM: PilT protein domain protein; KEGG: bgl:bglu_1p1060 predicted nucleic acid- binding protein, contains PIN domain.
       0.663
Cwoe_3176
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KR domain protein; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr6767 UDP-glucose 4-epimerase.
  
  
 0.655
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.