STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3779PFAM: 2-nitropropane dioxygenase NPD; KEGG: xfa:XF0121 hypothetical protein. (353 aa)    
Predicted Functional Partners:
Cwoe_0438
PFAM: 2-nitropropane dioxygenase NPD; KEGG: avn:Avin_42160 2-nitropropane dioxygenase- like dioxygenase.
  
  
 
0.928
Cwoe_1488
KEGG: dat:HRM2_00630 NarI; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; C4- dicarboxylate transporter/malic acid transport protein.
    
  0.903
Cwoe_1490
TIGRFAM: nitrate reductase, beta subunit; KEGG: rme:Rmet_2075 respiratory nitrate reductase beta subunit.
    
  0.902
Cwoe_1491
KEGG: dat:HRM2_00660 NarG; TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.902
Cwoe_4158
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
  
 0.664
Cwoe_4162
PFAM: Acyl transferase; KEGG: aeh:Mlg_1422 [acyl-carrier-protein] S- malonyltransferase.
 
  
 0.625
tadA
CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
    
 0.594
Cwoe_2055
PFAM: protein of unknown function DUF35; 3-Oxoacyl- [acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: bbr:BB3139 hypothetical protein.
  
  
 0.569
Cwoe_4159
PFAM: phosphopantetheine-binding; KEGG: YALI0D24629p.
 
 
 0.561
Cwoe_2869
PFAM: carboxyl transferase; KEGG: pyruvate carboxylase subunit B.
  
  
 0.549
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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