STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3781PFAM: Type II secretion system F domain; KEGG: nmu:Nmul_A2353 type II secretion system protein. (281 aa)    
Predicted Functional Partners:
Cwoe_3780
PFAM: Type II secretion system F domain; KEGG: ank:AnaeK_2911 type II secretion system protein.
 
  
 0.998
Cwoe_3782
PFAM: type II secretion system protein E; KEGG: cti:RALTA_A0690 Tad secretion sytem protein, secretion ATPase.
 
  
 0.992
Cwoe_3787
Hypothetical protein; KEGG: rme:Rmet_0648 Flp pilus assembly CpaB.
  
  
 0.852
Cwoe_0829
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: noc:Noc_0335 PAS sensor diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein.
  
    0.590
Cwoe_1770
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: noc:Noc_0335 PAS sensor diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein.
  
    0.590
Cwoe_3783
KEGG: mlo:mlr6918 hypothetical protein.
       0.566
Cwoe_5361
PFAM: Stage II sporulation E family protein; response regulator receiver; SMART: protein phosphatase 2C domain protein; response regulator receiver; KEGG: dma:DMR_38770 response regulator receiver protein.
   
    0.546
Cwoe_3436
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sfu:Sfum_4027 cyclic nucleotide-binding protein.
   
    0.501
Cwoe_3440
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: afw:Anae109_0802 putative anti-sigma regulatory factor, serine/threonine protein kinase.
   
    0.501
Cwoe_0022
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: ppd:Ppro_3455 flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
  
    0.485
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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