STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3828PFAM: alpha/beta hydrolase fold; KEGG: bja:bll1114 epoxide hydrolase. (330 aa)    
Predicted Functional Partners:
Cwoe_4703
TIGRFAM: FAD-linked oxidoreductase; PFAM: D-arabinono-14-lactone oxidase; FAD linked oxidase domain protein; KEGG: bur:Bcep18194_B3008 FAD-linked oxidoreductase.
 
     0.725
Cwoe_3829
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: bgl:bglu_2g22480 transcriptional regulator, XRE family protein.
  
    0.567
Cwoe_0795
PFAM: alpha/beta hydrolase fold; KEGG: similar to abhydrolase domain containing 9.
  
     0.519
Cwoe_5781
PFAM: alpha/beta hydrolase fold; KEGG: pmy:Pmen_0672 alpha/beta hydrolase fold.
  
     0.516
Cwoe_1179
PFAM: alpha/beta hydrolase fold; KEGG: similar to abhydrolase domain containing 9.
  
     0.495
Cwoe_3881
PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_5814 alpha/beta hydrolase fold.
  
     0.434
Cwoe_0534
PFAM: alpha/beta hydrolase fold; KEGG: pla:Plav_1611 haloalkane dehalogenase.
  
     0.431
Cwoe_1136
Hypothetical protein; KEGG: bra:BRADO4118 alpha/beta family hydrolase.
  
     0.428
Cwoe_2082
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ank:AnaeK_2445 short-chain dehydrogenase/reductase SDR.
 
   0.427
Cwoe_0281
PFAM: fatty acid hydroxylase; KEGG: mxa:MXAN_6907 hypothetical protein.
  
 
   0.423
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.