STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3883PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: lhk:LHK_01714 RbsB. (346 aa)    
Predicted Functional Partners:
Cwoe_3888
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_2027 ABC transporter protein, ATP binding component.
 
 0.980
Cwoe_3887
PFAM: inner-membrane translocator; KEGG: bam:Bamb_1424 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.932
Cwoe_2030
PFAM: inner-membrane translocator; KEGG: bpm:BURPS1710b_A1792 sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.853
Cwoe_2344
PFAM: inner-membrane translocator; KEGG: ara:Arad_9661 sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.853
Cwoe_4121
PFAM: inner-membrane translocator; KEGG: dac:Daci_3181 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.853
Cwoe_0561
PFAM: inner-membrane translocator; KEGG: rle:RL0631 putative transmembrane component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.852
Cwoe_2746
PFAM: inner-membrane translocator; KEGG: mlo:mll1678 permease protein of ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.852
Cwoe_2090
PFAM: inner-membrane translocator; KEGG: bte:BTH_II1626 L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.851
Cwoe_2302
PFAM: inner-membrane translocator; KEGG: rhi:NGR_b04290 predicted AraH, ribose/xylose/arabinose/galactoside ABC-type transport system, permease components AraH.
 
 
 0.851
Cwoe_2981
PFAM: inner-membrane translocator; KEGG: mes:Meso_0263 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.851
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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