STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3885PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: hypothetical protein. (657 aa)    
Predicted Functional Partners:
Cwoe_3884
PFAM: Aldehyde Dehydrogenase; KEGG: bcj:BCAL1153 putative salicylaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.799
Cwoe_3886
PFAM: Aldehyde Dehydrogenase; KEGG: psb:Psyr_2407 aldehyde dehydrogenase.
  
  
 0.799
Cwoe_3887
PFAM: inner-membrane translocator; KEGG: bam:Bamb_1424 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.773
Cwoe_3888
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_2027 ABC transporter protein, ATP binding component.
       0.773
Cwoe_3879
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rso:RSc1823 nitrilase protein.
 
  
 0.691
Cwoe_0883
PFAM: Ankyrin; SMART: Ankyrin; KEGG: ANK25; hypothetical protein.
    
 0.669
Cwoe_4888
KEGG: mei:Msip34_0093 hypothetical protein.
    
 0.659
Cwoe_3215
PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: bpt:Bpet0240 hypothetical protein.
    
 0.634
Cwoe_4861
KEGG: pcr:Pcryo_0026 hypothetical protein.
    
 0.634
Cwoe_3882
PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr3433 crotonobetaine/carnitine-CoA ligase.
     
 0.576
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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