STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3911PFAM: DoxX family protein; KEGG: net:Neut_1178 DoxX family protein. (189 aa)    
Predicted Functional Partners:
Cwoe_3910
TIGRFAM: probable F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup; KEGG: bbt:BBta_3300 putative alkanesulfonate monooxygenase.
 
     0.617
Cwoe_3912
Hypothetical protein.
       0.581
Cwoe_3909
Hypothetical protein; KEGG: mca:MCA0618 glycosyl transferase, group 1 family protein.
       0.448
Cwoe_0891
PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: bba:Bd2432 hypothetical protein.
 
    0.444
Cwoe_1723
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_B2097 calcium transporting P-type ATPase.
   
 
 0.425
Cwoe_4579
PFAM: peptidase M50; KEGG: rpf:Rpic12D_2396 peptidase M50.
 
     0.400
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.