STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3946PFAM: metallophosphoesterase; KEGG: hch:HCH_01549 phosphohydrolase. (367 aa)    
Predicted Functional Partners:
Cwoe_3947
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpt:Bpet0688 ABC transporter ATP-binding protein.
       0.618
Cwoe_3945
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rpb:RPB_1671 amidohydrolase.
       0.530
Cwoe_3944
PFAM: Cupin 2 conserved barrel domain protein; KEGG: bpt:Bpet3140 hypothetical protein.
       0.483
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.