STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3956PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA0128 sugar ABC transporter permease. (309 aa)    
Predicted Functional Partners:
Cwoe_3955
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sml:Smlt3250 putative sugar transporter, permease protein.
 
 0.977
Cwoe_3957
PFAM: extracellular solute-binding protein family 1; KEGG: avi:Avi_7590 ABC transporter substrate binding protein (sugar).
 
 0.973
Cwoe_3954
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL120029 putative ATP-binding transporter; Belongs to the ABC transporter superfamily.
 
 
 0.957
Cwoe_5095
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_5379 putative sugar ABC transporter, permease protein.
 
 0.907
Cwoe_3981
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2313 binding-protein-dependent transport systems inner membrane component.
 
 0.906
Cwoe_5800
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sml:Smlt3250 putative sugar transporter, permease protein.
 
 0.906
Cwoe_0173
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0078 ABC sugar transporter, inner membrane subunit.
 
 0.905
Cwoe_0376
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL1659 putative transmembrane component of ABC transporter.
 
 0.905
Cwoe_4881
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sml:Smlt3250 putative sugar transporter, permease protein.
 
 0.905
Cwoe_4452
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlg:Rleg_1308 binding-protein-dependent transport systems inner membrane component.
 
 0.904
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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