STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4118Putative transcriptional regulator, PucR family; KEGG: mpt:Mpe_B0536 CdaR family transcriptional regulator. (498 aa)    
Predicted Functional Partners:
Cwoe_4117
PFAM: protein of unknown function DUF917; KEGG: mlo:mll9130 hypothetical protein.
 
     0.788
Cwoe_4116
PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mlo:mll9131 hydantoinase.
 
     0.770
Cwoe_4109
PFAM: protein of unknown function DUF917; KEGG: mlo:mll9130 hypothetical protein.
 
     0.745
Cwoe_4110
PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: scl:sce2620 N-methylhydantoinase A, beta- subunit (ATP-hydrolyzing).
 
     0.734
Cwoe_3341
Transcriptional regulator, CdaR; PFAM: GAF domain protein; KEGG: bpd:BURPS668_A1119 putative purine catabolism transcriptional regulator.
 
     0.727
Cwoe_2327
Transcriptional regulator, CdaR; PFAM: purine catabolism PurC domain protein; helix- turn-helix Fis-type; regulatory protein LysR; KEGG: pag:PLES_34081 putative regulatory protein.
 
     0.719
Cwoe_2290
KEGG: tmz:Tmz1t_0150 transcriptional regulator, CdaR.
  
     0.706
Cwoe_5254
KEGG: dda:Dd703_0778 transcriptional regulator, PucR family.
  
     0.694
Cwoe_4239
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: reu:Reut_B5661 CdaR family transcriptional regulator.
  
     0.686
Cwoe_3483
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; helix- turn-helix Fis-type; KEGG: reu:Reut_B5661 CdaR family transcriptional regulator.
  
     0.682
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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