STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntHMn2+/Fe2+ transporter, NRAMP family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. (433 aa)    
Predicted Functional Partners:
Cwoe_4172
PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor.
 
  
 0.922
Cwoe_4170
Hypothetical protein.
       0.773
Cwoe_4168
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: afw:Anae109_3974 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.720
Cwoe_4169
Hypothetical protein.
       0.712
Cwoe_4173
TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mxa:MXAN_6341 glycine cleavage system T protein; Belongs to the GcvT family.
     
 0.591
Cwoe_4739
PFAM: ABC-3 protein; KEGG: aeh:Mlg_1043 ABC-3 protein.
  
  
 0.583
Cwoe_2382
PFAM: ABC-3 protein; KEGG: aeh:Mlg_1043 ABC-3 protein.
  
  
 0.575
Cwoe_5755
PFAM: ABC-3 protein; KEGG: tcx:Tcr_2146 hypothetical protein.
  
  
 0.575
Cwoe_5756
PFAM: ABC-3 protein; transport system permease protein; KEGG: tcx:Tcr_2147 ABC-type Mn2+/Zn2+ transport systems permease components.
  
  
 0.575
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
  
 0.571
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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