STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4218PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: lpf:lpl0007 hypothetical protein. (311 aa)    
Predicted Functional Partners:
Cwoe_4219
Agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: pla:Plav_2804 agmatine deiminase; Belongs to the agmatine deiminase family.
 
 0.999
Cwoe_2579
TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: pub:SAR11_1329 agmatinase; Belongs to the arginase family.
  
 0.937
Cwoe_2295
PFAM: aminotransferase class-III; KEGG: psb:Psyr_4866 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.906
Cwoe_5404
PFAM: aminotransferase class-III; KEGG: bcj:BCAM0190 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.906
Cwoe_0991
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pau:PA14_17730 hypothetical protein.
  
     0.760
Cwoe_4736
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pat:Patl_1505 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
  
     0.760
Cwoe_4217
KEGG: bba:Bd2872 hypothetical protein.
   
   0.634
Cwoe_3902
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: seg:SG3027 possible hydrolase.
  
     0.583
Cwoe_4220
KEGG: ade:Adeh_0345 hypothetical protein.
       0.549
Cwoe_4221
Hypothetical protein.
       0.549
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.