STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4233PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: eba:ebA6733 putative methyltransferase. (274 aa)    
Predicted Functional Partners:
Cwoe_4234
PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: rfr:Rfer_4108 3-demethylubiquinone-9 3- methyltransferase.
  
    0.578
Cwoe_4235
PFAM: GCN5-related N-acetyltransferase; KEGG: bcj:BCAM1700 putative acetyltransferase.
       0.571
Cwoe_4232
PFAM: protein of unknown function DUF255; KEGG: tgr:Tgr7_2744 hypothetical protein.
       0.549
Cwoe_2475
KEGG: cja:CJA_2305 hypothetical protein.
 
    0.497
Cwoe_5499
PFAM: Methyltransferase type 11; Methionine biosynthesis MetW protein; Methyltransferase type 12; KEGG: bba:Bd3625 3-demethylubiquinone-9 3- methyltransferase.
  
     0.477
Cwoe_4231
TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: hha:Hhal_0968 putative endoribonuclease L-PSP.
   
   0.453
Cwoe_4230
TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: glo:Glov_0480 threonine dehydratase.
  
  
 0.436
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.