STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4293PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: pca:Pcar_0061 ABC-type transport system, permease component. (230 aa)    
Predicted Functional Partners:
Cwoe_4295
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: dvl:Dvul_1937 cobalt ABC transporter, inner membrane subunit CbiQ.
 
 0.997
Cwoe_4296
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.996
Cwoe_4294
Hypothetical protein; KEGG: gur:Gura_2762 cobalamin (vitamin B12) biosynthesis CbiM protein.
 
  
  0.989
Cwoe_4292
Fe2+/Zn2+ uptake regulation protein-like protein; KEGG: mxa:MXAN_3702 FUR family transcriptional regulator; Belongs to the Fur family.
 
     0.845
Cwoe_3800
PFAM: cobalt transport protein; KEGG: vvu:VV2_1532 ABC-type cobalt transport system.
 
 
 0.839
Cwoe_5880
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: dma:DMR_44070 uroporphyrin-III C- methyltransferase/uroporphyrinogen-III synthase family protein.
 
  
 0.597
Cwoe_4297
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pap:PSPA7_4121 putative transcriptional regulator.
       0.572
Cwoe_4291
Hypothetical protein.
       0.530
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.