STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4295TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: dvl:Dvul_1937 cobalt ABC transporter, inner membrane subunit CbiQ. (261 aa)    
Predicted Functional Partners:
Cwoe_4296
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 0.999
Cwoe_4293
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: pca:Pcar_0061 ABC-type transport system, permease component.
 
 0.997
Cwoe_4294
Hypothetical protein; KEGG: gur:Gura_2762 cobalamin (vitamin B12) biosynthesis CbiM protein.
 
 0.997
Cwoe_0144
PFAM: BioY protein; KEGG: mxa:MXAN_2207 BioY family protein.
 
 
 0.893
Cwoe_4292
Fe2+/Zn2+ uptake regulation protein-like protein; KEGG: mxa:MXAN_3702 FUR family transcriptional regulator; Belongs to the Fur family.
 
  
 0.830
Cwoe_3799
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hha:Hhal_0379 ABC transporter related.
 
 0.688
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
  
 0.683
Cwoe_0116
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: scl:sce3461 oligopeptide ABC transporter ATP- binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.612
Cwoe_0454
KEGG: mes:Meso_3727 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 
 0.612
Cwoe_0579
KEGG: pfl:PFL_3161 peptide ABC transporter, ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 
 0.612
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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