STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4297Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pap:PSPA7_4121 putative transcriptional regulator. (232 aa)    
Predicted Functional Partners:
Cwoe_5712
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bav:BAV2585 GntR-family transcriptional regulator.
  
     0.775
Cwoe_4295
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: dvl:Dvul_1937 cobalt ABC transporter, inner membrane subunit CbiQ.
       0.584
Cwoe_4296
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
       0.584
Cwoe_4292
Fe2+/Zn2+ uptake regulation protein-like protein; KEGG: mxa:MXAN_3702 FUR family transcriptional regulator; Belongs to the Fur family.
     
 0.581
Cwoe_1316
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: azo:azo0997 glc operon transcriptional activator.
  
  
 0.579
Cwoe_4293
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: pca:Pcar_0061 ABC-type transport system, permease component.
       0.572
Cwoe_4294
Hypothetical protein; KEGG: gur:Gura_2762 cobalamin (vitamin B12) biosynthesis CbiM protein.
       0.572
Cwoe_4291
Hypothetical protein.
       0.405
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.