STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4415PFAM: peptidase C26; KEGG: afw:Anae109_0076 peptidase C26. (255 aa)    
Predicted Functional Partners:
Cwoe_4416
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: pla:Plav_2794 glutamate--ammonia ligase.
 
  
 0.901
Cwoe_4414
PFAM: Aldehyde Dehydrogenase; KEGG: vap:Vapar_6130 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
    0.790
Cwoe_4413
PFAM: iron-containing alcohol dehydrogenase; KEGG: scl:sce3952 alcohol dehydrogenase.
       0.783
Cwoe_4412
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: lhk:LHK_02842 PdhR.
       0.781
Cwoe_4411
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ade:Adeh_3296 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.777
Cwoe_4406
Glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region; KEGG: hypothetical protein.
 
  
 0.542
Cwoe_4417
PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: ppr:PBPRA2109 LacI family transcriptional regulator.
  
    0.520
Cwoe_0448
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rso:RSp0886 glutamine synthetase protein.
  
  
 0.438
Cwoe_4242
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: dvl:Dvul_0009 glutamine synthetase, type I.
  
  
 0.438
Cwoe_4418
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein.
       0.423
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.