STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4425PFAM: extracellular solute-binding protein family 1; KEGG: avi:Avi_5736 ABC transporter, substrate- binding protein. (446 aa)    
Predicted Functional Partners:
Cwoe_4424
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0945 binding-protein-dependent transport systems inner membrane component.
 
 
 0.951
Cwoe_4423
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3817 binding-protein-dependent transport systems inner membrane component.
 
 
 0.926
Cwoe_4422
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mlr7224 sugar ABC transportor, ATP- binding protein.
  
 
 0.839
Cwoe_0172
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2296 binding-protein-dependent transport systems inner membrane component.
 
 
 0.832
Cwoe_5095
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_5379 putative sugar ABC transporter, permease protein.
 
 
 0.774
Cwoe_0173
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0078 ABC sugar transporter, inner membrane subunit.
 
 
 0.772
Cwoe_0375
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0945 binding-protein-dependent transport systems inner membrane component.
 
 
 0.747
Cwoe_4426
KEGG: hypothetical protein.
       0.746
Cwoe_4427
PFAM: protein of unknown function DUF1271; KEGG: bxe:Bxe_C0944 putative ferredoxin.
       0.746
Cwoe_4428
PFAM: cytochrome P450; KEGG: bxe:Bxe_C0945 putative cytochrome P450.
       0.746
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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