STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4432KEGG: afw:Anae109_0256 hypothetical protein. (131 aa)    
Predicted Functional Partners:
Cwoe_4431
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: sme:SMa1939 hypothetical protein.
       0.566
Cwoe_5746
KEGG: mxa:MXAN_4488 hypothetical protein.
  
     0.535
Cwoe_3431
Hypothetical protein; KEGG: mxa:MXAN_0327 triple helix repeat-containing collagen.
  
     0.526
vapC-12
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   
 0.525
Cwoe_4434
PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: bav:BAV1824 transcriptional regulator.
 
     0.503
Cwoe_1394
Hypothetical protein.
   
 
 0.502
Cwoe_5218
PFAM: Collagen triple helix repeat; KEGG: mlo:mlr0587 hypothetical protein.
  
     0.501
Cwoe_0201
PFAM: peptidase S51 dipeptidase E; KEGG: vpa:VPA1746 hypothetical protein.
  
     0.471
Cwoe_1132
PFAM: GCN5-related N-acetyltransferase; KEGG: smd:Smed_3265 GCN5-related N- acetyltransferase.
  
     0.456
Cwoe_0200
PFAM: peptidase S51 dipeptidase E; KEGG: pol:Bpro_2070 peptidase S51, dipeptidase E; Belongs to the peptidase S51 family.
  
     0.429
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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