STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4449PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpa:BPP2296 short chain dehydrogenase. (257 aa)    
Predicted Functional Partners:
Cwoe_4448
PFAM: Dimethylmenaquinone methyltransferase; KEGG: ect:ECIAI39_0669 putative demethylmenaquinone methyltransferase.
       0.773
Cwoe_4446
PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: amc:MADE_00429 transcriptional repressor, LacI family protein.
  
   0.612
Cwoe_4451
Peptidase M24; KEGG: gem:GM21_4109 peptidase M24.
  
   0.589
Cwoe_4447
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: aav:Aave_3759 dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
     
 0.584
Cwoe_4450
KEGG: sme:SMc02332 hypothetical protein.
       0.566
Cwoe_3155
KEGG: hypothetical protein.
    
 0.470
Cwoe_5245
Beta-galactosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: sde:Sde_2632 HflK; Belongs to the glycosyl hydrolase 2 family.
  
  
 0.439
Cwoe_4445
PFAM: amine oxidase; KEGG: mxa:MXAN_4930 amine oxidase, flavin- containing.
     
 0.426
Cwoe_1873
TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: mxa:MXAN_2372 6-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
  
    0.413
Cwoe_5797
PFAM: PfkB domain protein; KEGG: bmn:BMA10247_A0142 6-phosphofructokinase.
  
    0.413
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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