STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4460PFAM: Xylose isomerase domain protein TIM barrel; KEGG: atc:AGR_pAT_594 hypothetical protein. (331 aa)    
Predicted Functional Partners:
Cwoe_4458
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rhi:NGR_b04540 putative dehydrogenases MviM.
  
  
 0.877
Cwoe_4459
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: rhi:NGR_c37050 predicted oxidoreductase domain protein.
  
  
 0.877
Cwoe_4457
PFAM: PHP domain protein; KEGG: wsu:WS0471 putative histidinol phosphatase; Belongs to the PHP hydrolase family. HisK subfamily.
 
     0.820
Cwoe_2977
Dehydrogenase-like protein; KEGG: lch:Lcho_0838 oxidoreductase domain- containing protein.
 
  
 0.677
Cwoe_5446
PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rhi:NGR_b04500 putative myo-inositol catabolism protein IolD; Belongs to the TPP enzyme family.
  
  
 0.632
Cwoe_5450
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: dac:Daci_0984 myo-inositol catabolism IolB domain-containing protein.
  
  
 0.601
Cwoe_4461
PFAM: aminoglycoside phosphotransferase; KEGG: scl:sce2725 phosphotransferase.
       0.565
Cwoe_4455
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL120029 putative ATP-binding transporter; Belongs to the ABC transporter superfamily.
       0.561
Cwoe_5109
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: lch:Lcho_1215 oxidoreductase domain- containing protein.
 
  
 0.549
Cwoe_4456
Hypothetical protein.
       0.548
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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